interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE CSL-NOTCH-MASTERMIND TERNARY COMPLEX BOUND TO DNA
(LIN-12 AND GLP-1 PHENOTYPE PROTEIN 1, ISOFORM B)
referenceWilson et al. 'Cell(Cambridge,Mass.)' 124 985 2006
sourceCAENORHABDITIS ELEGANS
experimentX-ray (resolution=3.12, R-factor=0.273)
structural superfamilyDNA-binding protein LAG-1 CSL;p53-like transcription factors;E set domains;
sequence familyBetatrefoil; LAG1, DNA binding; IPT/TIG domain;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureYERSKSQ

Estimated binding specificities ?

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# IC=5.300 IC/col=0.757 n_of_columns=7 specificity:   
A |   9   0  11  24   0  96   9
C |  11   0  67  24  96   0  67
G |   9   0   9  24   0   0   9
T |  67  96   9  24   0   0  11
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updated Mon Dec 16 19:35:06 2024