2hap_D : 3D-footprint complex

structure name	STRUCTURE OF A HAP1-18/DNA COMPLEX REVEALS THAT PROTEIN/DNA INTERACTIONS CAN HAVE DIRECT ALLOSTERIC EFFECTS ON TRANSCRIPTIONAL ACTIVATION (PROTEIN HEME ACTIVATOR PROTEIN)
reference	Marmorstein et al. Nat.Struct.Biol. 6 22 1999
source	Saccharomyces cerevisiae
experiment	X-ray (resolution=2.50, R-factor=0.248)
structural superfamily	Leucine zipper domain;Zn2/Cys6 DNA-binding domain;
sequence family	Fungal Zn2Cys6 binuclear cluster domain;
multimeric complexes	2hap_CD
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2hap_D interface=2,4,8,15,16,17, kRnRiplRcticrkRKVkcdklrphcqqctktgvahlchymeqtwaeeaekellkdnelkklrervkslektlsk
interface signature	RRRRKV

Estimated binding specificities ?

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# IC=7.454 IC/col=0.828 n_of_columns=9

specificity:

A |   6   0   0  12  24  19   0  96   7
C |  84   0  96  28  24  12   0   0   0
G |   6  96   0  12  24  12   0   0   6
T |   0   0   0  44  24  53  96   0  83

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updated Tue Dec 17 22:47:17 2024