interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF A HAP1-18/DNA COMPLEX REVEALS THAT PROTEIN/DNA INTERACTIONS CAN HAVE DIRECT ALLOSTERIC EFFECTS ON TRANSCRIPTIONAL ACTIVATION
(PROTEIN HEME ACTIVATOR PROTEIN)
referenceMarmorstein et al. Nat.Struct.Biol. 6 22 1999
sourceSaccharomyces cerevisiae
experimentX-ray (resolution=2.50, R-factor=0.248)
structural superfamilyLeucine zipper domain;Zn2/Cys6 DNA-binding domain;
sequence familyFungal Zn2Cys6 binuclear cluster domain;
multimeric complexes2hap_CD
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRRRRKV

Estimated binding specificities ?

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# IC=7.412 IC/col=0.824 n_of_columns=9 specificity:   
A |   6   0   0  13  24  13   0  96   0
C |  82   0  96  20  24  16   0   0   8
G |   8  96   0  13  24  13   0   0   6
T |   0   0   0  50  24  54  96   0  82
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updated Mon Jun 29 15:09:35 2026