2hos_AB : 3D-footprint complex

structure name	PHAGE-SELECTED HOMEODOMAIN BOUND TO UNMODIFIED DNA
reference	Feldman et al. 'Acs 1 755 2006
source	Drosophila melanogaster
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	2hos_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2hos_A interface=1,46,47, RtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKNmrakikkst > 2hos_B interface=49, krprtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKnmrakikks
interface signature	RKN/K

Estimated binding specificities ?

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# IC=8.776 IC/col=0.798 n_of_columns=11

specificity:

A |   0   0   5  24  24  11   0  73   0   5  91
C |   6  96  75  24  24   1   0   5   0   7   0
G |   0   0   5  24  24  73  96  11   0   5   5
T |  90   0  11  24  24  11   0   7  96  79   0

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updated Fri Dec 13 12:13:38 2024