2hos_AB : 3D-footprint complex

structure name	PHAGE-SELECTED HOMEODOMAIN BOUND TO UNMODIFIED DNA
reference	Feldman et al. 'Acs 1 755 2006
source	Drosophila melanogaster
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	2hos_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2hos_A interface=1,46,47, RtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKNmrakikkst > 2hos_B interface=49, krprtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKnmrakikks
interface signature	RKN/K

Estimated binding specificities ?

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# IC=8.723 IC/col=0.793 n_of_columns=11

specificity:

A |   0   0   6  24  24  12   0  83   0   6  89
C |   6  96  70  24  24   0   0   0   0   8   0
G |   1   0   8  24  24  70  96   7   0   6   6
T |  89   0  12  24  24  14   0   6  96  76   1

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updated Mon Sep 9 15:10:51 2024