2hot_AB : 3D-footprint complex

structure name	PHAGE SELECTED HOMEODOMAIN BOUND TO MODIFIED DNA
reference	Feldman et al. 'Acs 1 755 2006
source	Drosophila melanogaster
experiment	X-ray (resolution=2.19, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	2hos_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2hot_A interface=1,46,47, RtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKNmrakikkst > 2hot_B interface=49,50, krprtafsseqlarlkrefnenrylterrrqqlsselglneaqvkgwfKNmrakikks
interface signature	RKN/KN

Estimated binding specificities ?

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# IC=7.810 IC/col=0.781 n_of_columns=10

specificity:

A |   0  12  24  24   0   0  84   0   0  84
C |  96  42  24  24  24   0   6   0   0   0
G |   0  18  24  24  66  96   6   0   0   6
T |   0  24  24  24   6   0   0  96  96   6

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updated Tue Jul 29 17:48:28 2025