2i3p_AB : 3D-footprint complex

structure name	K28R MUTANT OF HOMING ENDONUCLEASE I-CREI
reference	Sussman et al. 'Nucleic 34 4791 2006
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	1t9i_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2i3p_A interface=21,23,25,27,29,31,32,37,43,45,65,67,69,72,138,139, ntkynkefllylagfvdgdgSiIaQiRpNqSYkfkhQlsltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 2i3p_B interface=21,23,25,27,29,31,32,37,39,43,45,65,67,69,72,138,139, ntkynkefllylagfvdgdgSiIaQiRpNqSYkfkhQlSltfQvTqktqrrwfldklvdeigvgYvRdRgsVsdyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQRNSYQQTYRRVKT/SIQRNSYQSQTYRRVKT

Estimated binding specificities ?

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# IC=21.643 IC/col=0.984 n_of_columns=22

specificity:

A |   0  96  96  24  25   0   0   0   0  14  24  24   0   0  96   0   0  51   0   0   0   0
C |   0   0   0  24  15   0   0   0  96   6  24  24  12   0   0  96   0   7   0   0   0   0
G |  96   0   0  24  12   0  96   0   0  12  24  24   1  96   0   0  96  19   0   0   0  96
T |   0   0   0  24  44  96   0  96   0  64  24  24  83   0   0   0   0  19  96  96  96   0

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updated Fri Dec 13 12:15:18 2024