2i3q_AB : 3D-footprint complex

structure name	Q44V MUTANT OF HOMING ENDONUCLEASE I-CREI
reference	Sussman et al. 'Nucleic 34 4791 2006
source	Chlamydomonas reinhardtii
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Homing endonucleases;
reference complex	2i3q_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2i3q_A interface=21,23,25,29,31,32,37,39,43,45,65,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiapNqSYkfkhQlSltfVvTqktqrrwfldklvdeigvgYvRdRgsVsDyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld > 2i3q_B interface=21,23,25,27,29,31,32,37,39,43,45,67,69,72,74,138,139, ntkynkefllylagfvdgdgSiIaQiApNqSYkfkhQlSltfVvTqktqrrwfldklvdeigvgyvRdRgsVsDyilseikplhnfltqlqpflklkqkqanlvlkiieqlpsakespdkflevctwvdqiaalndsKTrkttsetvravld
interface signature	SIQNSYQSVTYRRVDKT/SIQANSYQSVTRRVDKT

Estimated binding specificities ?

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# IC=14.916 IC/col=0.678 n_of_columns=22

specificity:

A |   0  81  88  30  27  10   0  96   5  12  21  20  70   0   0   0  74  22  25   6   8   1
C |  96   7   2  22  25  63   0   0  85  12  21  20  10   0   0  96   7  22  22   6   7  93
G |   0   4   2  22  22  13  96   0   3  60  21  36   8  96   0   0   8  27  22   6   7   1
T |   0   4   4  22  22  10   0   0   3  12  33  20   8   0  96   0   7  25  27  78  74   1

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updated Fri Dec 13 12:15:41 2024