2irf_GH : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX.
reference	Taniguchi et al. 'EMBO 18 5028 1999
source	Mus musculus
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	2irf_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2irf_G interface=76,79,83, rmrmrpwleeqinsntipglkwlnkekkifqipwmhaarhgwdvekdaplfrnwaihtgkhqpgidkpdpktwkaNfrCamnSlpdieevkdrsikkgnnafrvyrmlp > 2irf_H interface=36,71,75,76,78,79,82,83, rmrmrpwleeqinsntipglkwlnkekkifqipwmHaarhgwdvekdaplfrnwaihtgkhqpgidkpdpKtwkANfRCamNSlpdieevkdrsikkgnnafrvyrmlp
interface signature	NCS/HKANRCNS

Estimated binding specificities ?

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# IC=5.915 IC/col=0.657 n_of_columns=9

specificity:

A |  16  13   0  24  13  96   0  24   0
C |  54  20   0  24  54   0  96  24   0
G |  13  15   0  24  13   0   0  24   0
T |  13  48  96  24  16   0   0  24  96

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updated Fri Dec 13 12:16:58 2024