2irf_IJKL : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX.
reference	Taniguchi et al. 'EMBO 18 5028 1999
source	Mus musculus
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	2irf_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2irf_I interface=36,76,78,79,82,83, rmrmrpwleeqinsntipglkwlnkekkifqipwmHaarhgwdvekdaplfrnwaihtgkhqpgidkpdpktwkaNfRCamNSlpdieevkdrsikkgnnafrvyrmlp > 2irf_J interface=36,75,76,78,79,80,82,83, rmrmrpwleeqinsntipglkwlnkekkifqipwmHaarhgwdvekdaplfrnwaihtgkhqpgidkpdpktwkANfRCAmNSlpdieevkdrsikkgnnafrvyrmlp > 2irf_K interface=36,76,78,79,82,83, rmrmrpwleeqinsntipglkwlnkekkifqipwmHaarhgwdvekdaplfrnwaihtgkhqpgidkpdpktwkaNfRCamNSlpdieevkdrsikkgnnafrvyrmlp > 2irf_L interface=36,71,75,76,78,79,82,83, rmrmrpwleeqinsntipglkwlnkekkifqipwmHaarhgwdvekdaplfrnwaihtgkhqpgidkpdpKtwkANfRCamNSlpdieevkdrsikkgnnafrvyrmlp
interface signature	HNRCNS/HANRCANS/HNRCNS/HKANRCNS

Estimated binding specificities ?

readout + contact

# IC=18.541 IC/col=0.806 n_of_columns=23

specificity:

A |   2   5   0  24   1  96   0  24   0  24   4  24   2   2   0  10   4  96   0  24   0  24   5
C |  90   7   0  24  93   0  96  24   0  24  88  24  83   4   0  12  88   0  89  24   0  24  90
G |   2  10   0  24   0   0   0  24   0  24   2  24   9   2   0  10   2   0   0  24   0  24   0
T |   2  74  96  24   2   0   0  24  96  24   2  24   2  88  96  64   2   0   7  24  96  24   1

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updated Tue Jul 29 17:50:45 2025