2irf_IJKL : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF AN IRF-2/DNA COMPLEX.
reference	Taniguchi et al. 'EMBO 18 5028 1999
source	Mus musculus
experiment	X-ray (resolution=2.20, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	2irf_L
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2irf_I interface=36,76,78,79,82,83, rmrmrpwleeqinsntipglkwlnkekkifqipwmHaarhgwdvekdaplfrnwaihtgkhqpgidkpdpktwkaNfRCamNSlpdieevkdrsikkgnnafrvyrmlp > 2irf_J interface=75,76,78,79,80,82,83, rmrmrpwleeqinsntipglkwlnkekkifqipwmhaarhgwdvekdaplfrnwaihtgkhqpgidkpdpktwkANfRCAmNSlpdieevkdrsikkgnnafrvyrmlp > 2irf_K interface=36,76,78,79,82,83, rmrmrpwleeqinsntipglkwlnkekkifqipwmHaarhgwdvekdaplfrnwaihtgkhqpgidkpdpktwkaNfRCamNSlpdieevkdrsikkgnnafrvyrmlp > 2irf_L interface=71,75,76,78,79,82,83, rmrmrpwleeqinsntipglkwlnkekkifqipwmhaarhgwdvekdaplfrnwaihtgkhqpgidkpdpKtwkANfRCamNSlpdieevkdrsikkgnnafrvyrmlp
interface signature	HNRCNS/ANRCANS/HNRCNS/KANRCNS

Estimated binding specificities ?

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# IC=17.318 IC/col=0.825 n_of_columns=21

specificity:

A |   0  24  96  24  80   8   0   4  96  72  12  24   0  24  96  24   0   4   0   4  96
C |   0  24   0  24   4   8   0   0   0   8   8  24   0  24   0  24   0   4   0   4   0
G |  96  24   0  24  12  12  96   0   0   4  68  24  96  24   0  24  96   4  96   0   0
T |   0  24   0  24   0  68   0  92   0  12   8  24   0  24   0  24   0  84   0  88   0

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updated Mon Jan 5 00:48:52 2026