2nny_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE ETS1 DIMER DNA COMPLEX.
reference	Kachalova et al. 'Embo 27 2006 2008
source	Homo sapiens
experiment	X-ray (resolution=2.58, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2nny_A interface=80,81,84,87,88, vrdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkssqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkryvyrfvsdlqsllgytpeelhamldvk > 2nny_B interface=80,81,84,87,88,102, vrdradlnkdkpvipaaalagytgsgpiqlwqfllelltdkssqsfiswtgdgwefklsdpdevarrwgkrknkpkmnyEKlsRglRYyydkniihktagkRyvyrfvsdlqsllgytpeelhamldvk
interface signature	EKRRY/EKRRYR

Estimated binding specificities ?

readout + contact

# IC=12.315 IC/col=0.880 n_of_columns=14

specificity:

A |  82   0   0  91  77   9  24  24   4   6   0   0   0   0
C |   6   0   0   5   9   6  24  24  73   4   0  96  96   4
G |   4  96  96   0   4  77  24  24  10   4   0   0   0   4
T |   4   0   0   0   6   4  24  24   9  82  96   0   0  88

scan!

home
updated Fri Dec 13 12:28:24 2024