2o6g_EFGH : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF IRF-3 BOUND TO THE INTERFERON-B ENHANCER
reference	'Cell(Cambridge,Mass.)' 129 1111 2007
source	Homo sapiens
experiment	X-ray (resolution=3.10, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2o6g_E interface=40,76,77,79,80,84, tpkprilpwlvsqldlgqlegvawvnksrtrfripwkhgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSalnRkeglrlaedrskdphdphkiyefvns > 2o6g_F interface=37,39,75,76,78,79,83, pkprilpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSalnRkeglrlaedrskdphdphkiyefvn > 2o6g_G interface=38,40,76,77,79,80,81,84, tpkprilpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSAlnRkeglrlaedrskdphdphkiyefvns > 2o6g_H interface=37,39,75,76,78,79,80,83, pkprilpwlvsqldlgqlegvawvnksrtrfripwkHgLrqdaqqedfgifqawaeatgayvpgrdkpdlptwkRNfRSAlnRkeglrlaedrskdphdphkiyefvn
interface signature	LRNRSR/HLRNRSR/HLRNRSAR/HLRNRSAR

Estimated binding specificities ?

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# IC=19.982 IC/col=0.908 n_of_columns=22

specificity:

A |   0   0  96  62  96  24   3   0  80  86  65   1   0   0  96  94  86  24   6  24  80  88
C |   0   0   0   0   0  24   5   0   5   0   3   3   0   1   0   0   6  24   5  24   1   1
G |  96  96   0  33   0  24   5  94   8   9   1  86  96  95   0   1   1  24   5  24   3   6
T |   0   0   0   1   0  24  83   2   3   1  27   6   0   0   0   1   3  24  80  24  12   1

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updated Fri Dec 13 12:48:46 2024