structure name | AMBER REFINED NMR STRUCTURE OF THE SIGMA-54 RPON DOMAIN BOUND TO THE- 24 PROMOTER ELEMENT (RNA POLYMERASE SIGMA FACTOR RPON) |
source | AQUIFEX AEOLICUS |
experiment | NMR |
structural superfamily | "Winged helix" DNA-binding domain; |
sequence family | Sigma54, DNA binding domain 124; |
redundant complexes | 2o8k |
reference complex | 2o8k_A |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | DRRTKR |
Estimated binding specificities ?
readout + contact |
A | 0 0 9 0 96 24 67 67 C | 0 0 67 96 0 24 11 11 G | 0 96 11 0 0 24 9 9 T | 96 0 9 0 0 24 9 9scan! |
Related DNA sequences reported in the literature ?
site | source | matches (E-value) |
---|---|---|
term: SIGMA-54 | ||
TACCA | PubMed | 2o9l_A(9.74e-03) |
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updated Thu Sep 12 16:24:49 2024