2og0_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE LAMBDA XIS-DNA COMPLEX
reference	Papagiannis et al. J.Mol.Biol. 367 328 2007
source	ENTEROBACTERIA PHAGE LAMBDA
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	Putative DNA-binding domain;
reference complex	1rh6_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2og0_A interface=19,23, myltlqewnarqrrprslEtvrRwvresrifpppvkdgreylfhesavkvd > 2og0_B interface=19,23,26,39, myltlqewnarqrrprslEtvrRwvResrifpppvkdgReylfhesavkvdl
interface signature	ER/ERRR

Estimated binding specificities ?

readout + contact

# IC=9.834 IC/col=0.615 n_of_columns=16

specificity:

A |  90  12  24  24  62   0   1  96   0  59  24  24  24  10  72   0
C |   1  72  24  24  10  96   2   0  96  17  24  24  24   7   7  96
G |   5   5  24  24  15   0   0   0   0  10  24  24  24  10   7   0
T |   0   7  24  24   9   0  93   0   0  10  24  24  24  69  10   0

scan!

home
updated Fri Dec 13 12:55:27 2024