2og0_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE LAMBDA XIS-DNA COMPLEX
reference	Papagiannis et al. J.Mol.Biol. 367 328 2007
source	ENTEROBACTERIA PHAGE LAMBDA
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	Putative DNA-binding domain;
reference complex	1rh6_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2og0_A interface=19,23, myltlqewnarqrrprslEtvrRwvresrifpppvkdgreylfhesavkvd > 2og0_B interface=19,23,26,39, myltlqewnarqrrprslEtvrRwvResrifpppvkdgReylfhesavkvdl
interface signature	ER/ERRR

Estimated binding specificities ?

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# IC=9.736 IC/col=0.609 n_of_columns=16

specificity:

A |  90  10  24  24  60   0   1  96   0  57  24  24  24   5  68   0
C |   1  76  24  24   8  96   2   0  96  16  24  24  24  13   8  96
G |   5   5  24  24  20   0   0   0   0  10  24  24  24  13  10   0
T |   0   5  24  24   8   0  93   0   0  13  24  24  24  65  10   0

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updated Mon Sep 9 15:49:54 2024