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legend  pdf

structure nameBACTERIOPHAGE LAMBDA EXCISIONASE (XIS)-DNA COMPLEX
(EXCISIONASE)
referenceJohnson et al. J.Mol.Biol. 338 229 2004
sourceENTEROBACTERIA PHAGE LAMBDA
experimentX-ray (resolution=1.70, R-factor=0.193)
structural superfamilyPutative DNA-binding domain;
sequence familyExcisionaselike protein;
multimeric complexes1rh6_AB 2og0_AB 6p0u_ABEF
redundant complexes2ief_B 2og0_B 6p0u
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureETRRRR

Estimated binding specificities ?

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# IC=6.294 IC/col=0.699 n_of_columns=9 specificity:   
A |   0   0  96   0  24   8  24  17  10
C |   0   0   0   0  24  63  24   8  17
G |  96   0   0  96  24   8  24  63  17
T |   0  96   0   0  24  17  24   8  52
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Dendrogram of similar interfaces ?

matrix format

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updated Tue Dec 17 22:20:51 2024