interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE BASIC-HELIX-LOOP-HELIX DOMAINS OF THE HETERODIMER E47/NEUROD1 BOUND TO DNA
referenceGuanga et al. Biochemistry 47 218 2008
sourceMUS MUSCULUS
experimentX-ray (resolution=2.50, R-factor=?)
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNRER/NER

Estimated binding specificities ?

readout + contactlogo
# IC=5.807 IC/col=0.726 n_of_columns=8 specificity:   
A |  13   0  96  24  24   0   0  13
C |  57  96   0  24  24   0   0  16
G |  13   0   0  24  24   0  96  54
T |  13   0   0  24  24  96   0  13
scan!

home
updated Fri Dec 13 13:06:02 2024