| structure name | CRYSTAL STRUCTURE OF THE BASIC-HELIX-LOOP-HELIX DOMAINS OF THE HETERODIMER E47/NEUROD1 BOUND TO DNA (NEUROGENIC DIFFERENTIATION FACTOR 1) |
| reference | Guanga et al. Biochemistry 47 218 2008 |
| source | MUS MUSCULUS |
| experiment | X-ray (resolution=2.50, R-factor=?) |
| structural superfamily | HLH, helix-loop-helix DNA-binding domain; |
| sequence family | Helixloophelix DNAbinding domain; |
| multimeric complexes | 2ql2_AB 2ql2_CD |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: NEUROD1 | ||
| CATCTG | PubMed | 2ql2_AB(6.34e-03), 2ql2_CD(6.34e-03) |
Dendrogram of similar interfaces ?
matrix format--HGNT--MTEA--RCRG +-----------------------------1nlw_D +-3 --HGNT----EC--RCRG L ! +-----------------------------1nkp_A +-4 NT--RAEC----RC---- ! ! +2ypa_B ! ! +----------------1 --HGNT----EC--RCRG L --5 +------------2 +7d8t_A ! ! NG----ECRG--RC---- L ! +----------------6od3_F ! --HGNT----EC--RCRG +-----------------------------1nkp_E |
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updated Fri Sep 13 16:39:41 2024