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legend  pdf

structure nameCRYSTAL STRUCTURE OF RAD4-RAD23 BOUND TO A UV-DAMAGED DNA
(DNA REPAIR PROTEIN RAD4)
referencePavletich et al. Nature 449 570 2007
sourceSACCHAROMYCES CEREVISIAE
experimentX-ray (resolution=3.10, R-factor=0.248)
structural superfamilyCysteine proteinases;
sequence familyRad4 transglutaminaselike domain; Rad4 betahairpin domain 3; Rad4 betahairpin domain 1; Rad4 betahairpin domain 2;
reference complex2qsh_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRHRQMNFNEVFFERTKP

Estimated binding specificities ?

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# IC=3.587 IC/col=0.897 n_of_columns=4 specificity:   
A |  13   2   0   9
C |  10   1   0   4
G |  11   0   0  79
T |  62  93  96   4
scan!

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updated Thu Jan 8 20:36:27 2026