2r5y_AB : 3D-footprint complex

structure name	STRUCTURE OF SCR/EXD COMPLEX BOUND TO A CONSENSUS HOX-EXD SITE
reference	Aggarwal et al. 'Cell(Cambridge,Mass.)' 131 530 2007
source	DROSOPHILA MELANOGASTER
experiment	X-ray (resolution=2.60, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2r5y_A interface=17,59,62,63,66, gkknppqiypwmkrvqRtsytryqtlelekefhfnryltrrrrieiahalslterqikIwfQNrrMkwkkehk > 2r5y_B interface=1,46,50,53,54, RrnfskqaseilneyfyshlsnpypseeakeelarkcgitvsqvsNwfgNkrIRykkni
interface signature	RIQNM/RNNIR

Estimated binding specificities ?

readout + contact

# IC=10.999 IC/col=1.100 n_of_columns=10

specificity:

A |   0  24  48   0  96  96  96   0   0  96
C |  96  48  12   0   0   0   0   0  96   0
G |   0  12  24   0   0   0   0   0   0   0
T |   0  12  12  96   0   0   0  96   0   0

scan!

home
updated Fri Dec 13 13:07:11 2024