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legend  pdf

structure nameSTRUCTURE OF LEAFY TRANSCRIPTION FACTOR FROM ARABIDOPSIS THALIANA IN COMPLEX WITH DNA FROM AP1 PROMOTER
(PROTEIN LEAFY)
referencePtchelkine et al. 'Embo 27 2628 2008
sourceARABIDOPSIS THALIANA
experimentX-ray (resolution=2.10, R-factor=0.226)
structural superfamilyHomeodomain-like;
sequence familyFloricaula / Leafy protein;
redundant complexes2vy2_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNKPR

Estimated binding specificities ?

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# IC=5.339 IC/col=0.593 n_of_columns=9 specificity:   
A |  11   0   0   0  24  24  24  11  69
C |   9   0   0   0  24  24  24   9   9
G |   9  96  96   0  24  24  24   9   9
T |  67   0   0  96  24  24  24  67   9
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updated Sat Jan 10 05:37:39 2026