interface graph thumbnail
legend  pdf

structure nameSTRUCTURE OF LEAFY TRANSCRIPTION FACTOR FROM ARABIDOPSIS THALIANA IN COMPLEX WITH DNA FROM AG-I PROMOTER
(PROTEIN LEAFY)
referencePtchelkine et al. 'Embo 27 2628 2008
sourceARABIDOPSIS THALIANA
experimentX-ray (resolution=2.30, R-factor=0.232)
structural superfamilyHomeodomain-like;
sequence familyFloricaula / Leafy protein;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRNKP

Estimated binding specificities ?

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# IC=4.475 IC/col=0.497 n_of_columns=9 specificity:   
A |  13   0   0  13  24  24  24  24  96
C |  13   0   0  16  24  24  24  24   0
G |  13  96  96  13  24  24  24  24   0
T |  57   0   0  54  24  24  24  24   0
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updated Mon Dec 16 20:10:09 2024