2wbu_A : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE ZINC FINGER DOMAIN OF KLF4 BOUND TO ITS TARGET DNA (KRUEPPEL-LIKE FACTOR 4)
reference	Carstanjen et al. 'Cell.Mol.Life 68 3121 2011
source	MUS MUSCULUS
experiment	X-ray (resolution=2.50, R-factor=0.220)
structural superfamily	beta-beta-alpha zinc fingers;
sequence family	Zinc finger, C2H2 type;
reference complex	2wbs_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2wbu_A interface=15,17,18,45,46,47,48,51,73,75,76, thtcdyagcgktytKsSHlkahlrthtgekpyhcdwdgcgwkfaRSDEltRhyrkhtghrpfqcqkcdrafsRsDHlalhmkrhf
interface signature	KSHRSDERRDH

Estimated binding specificities ?

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# IC=10.392 IC/col=1.039 n_of_columns=10

specificity:

A |   8   0   0  96   0   0   0   0  10   8
C |  17  96  96   0  96   0  96  96  17  63
G |  61   0   0   0   0  96   0   0   8   8
T |  10   0   0   0   0   0   0   0  61  17

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updated Thu Sep 12 16:36:39 2024