2wt7_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE BZIP HETERODIMERIC COMPLEX MAFB:CFOS BOUND TO DNA
reference	Pogenberg et al. Structure 22 466 2014
source	MUS MUSCULUS
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	A DNA-binding domain in eukaryotic transcription factors;
reference complex	2wt7_A 2wt7_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2wt7_A interface=6,10,13,14,17,18, ekrriRrerNkmAAakCRnrrreltdtlqaetdqledeksalqteianllkekeklefilaah > 2wt7_B interface=31,35,38,39,42,43, dqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvkseklan
interface signature	RNAACR/RNYACR

Estimated binding specificities ?

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# IC=10.563 IC/col=0.960 n_of_columns=11

specificity:

A |  61   0   0  96   0   0  24  61   0   0  72
C |   8   0   0   0   0   0  24   8   0  96   8
G |  17   0  96   0  96   0  24   8  96   0   8
T |  10  96   0   0   0  96  24  19   0   0   8

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updated Mon Sep 9 16:06:44 2024