2wty_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE HOMODIMERIC MAFB IN COMPLEX WITH THE T-MARE BINDING SITE
reference	Consani Textor et al. Structure 22 466 2014
source	MUS MUSCULUS
experiment	X-ray (resolution=2.90, R-factor=?)
structural superfamily	A DNA-binding domain in eukaryotic transcription factors;
reference complex	2wt7_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2wty_A interface=33,37,40,41,44,45, sddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvkseklansg > 2wty_B interface=35,39,42,43,46,47, mfsddqlvsmsvrelnrhlrgftkdevirlkqkrRtlkNrgYAqsCRykrvqqkhhlenektqliqqveqlkqevsrlarerdaykvkseklansgr
interface signature	RNYACR/RNYACR

Estimated binding specificities ?

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# IC=10.269 IC/col=0.790 n_of_columns=13

specificity:

A |   8   0   0  24  24  96  16   0  24  56   0   0  96
C |   8   0  96  24  24   0  48   0  24  16   0  96   0
G |   8  96   0  24  24   0  16   0  24  16  96   0   0
T |  72   0   0  24  24   0  16  96  24   8   0   0   0

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updated Mon Sep 9 16:07:46 2024