| structure name | ATOMIC MODEL OF THE DNA-BOUND METHYLASE COMPLEX FROM THE TYPE I RESTRICTION-MODIFICATION ENZYME ECOKI (M2S1). BASED ON FITTING INTO EM MAP 1534. (TYPE I RESTRICTION ENZYME ECOKI M PROTEIN) |
| reference | Obarska-Kosinska et al. 'Nucleic 37 762 2009 |
| source | ESCHERICHIA COLI |
| experiment | X-ray (resolution=18.00, R-factor=?) |
| structural superfamily | S-adenosyl-L-methionine-dependent methyltransferases; |
| sequence family | N6 DNA Methylase; |
| multimeric complexes | 2y7h_ABC |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: ECOKI | ||
| AACNNNNNNGTGC | PubMed | 2y7h_ABC(3.13e-03) |
Dendrogram of similar interfaces ?
matrix formatQA--------NAFA----------------------FA----VA---- +-------------2y7h_B +----2 --FA----------------------------------TATTIT---- +------3 +-------------7btq_A ! ! ----YGDGWG----------STEALGMAQG------------------ +-5 +------------------6ymv_B ! ! ----------NAFA--------------------WA--AAACVA---- L ! ! +--------------------5hr4_C --6 +----4 --VA------NAYA--YGKT----------------FAKAKGVA---- L ! +--------------------2ih2_D ! ------------CC----------------ECNC----------RCRC ! +-6kdb_D +-------------------------1 --------------NT-------------------------------- +-6pa7_K |
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updated Fri Sep 13 16:50:11 2024