2ypb_AB : 3D-footprint complex

structure name	STRUCTURE OF THE SCL:E47 COMPLEX BOUND TO DNA
reference	Hoosdally et al. 'Cell 4 135 2013
source	HOMO SAPIENS
experiment	X-ray (resolution=2.87, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2ypb_A interface=13,15,16,19,20, gphtkvvrriftNsRErwRQqnvngafaelrklipthppdkklskneilrlamkyinflakllndqe > 2ypb_B interface=17,20,23, sleekdlrdrerrmanNarErvRvrdineafrelgrmcqmhlksdkaqtkllilqqavqvilgleqqvrernln
interface signature	NRERQ/NER

Estimated binding specificities ?

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# IC=6.711 IC/col=0.746 n_of_columns=9

specificity:

A |   0  96   9  24   0   0   9  24   9
C |  96   0   9  24   0   0   9  24  69
G |   0   0   9  24   0  96  11  24   9
T |   0   0  69  24  96   0  67  24   9

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updated Fri Dec 13 13:20:41 2024