interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE OPERATOR-BINDING FORM OF THE MULTI-DRUG BINDING TRANSCRIPTIONAL REPRESSOR CGMR
(Transcriptional regulator)
referenceShirakihara et al. J.Mol.Biol. 403 174 2010
sourceCorynebacterium glutamicum
experimentX-ray (resolution=2.50, R-factor=0.222)
structural superfamilyTetracyclin repressor-like, C-terminal domain;Homeodomain-like;
sequence familyBacterial regulatory proteins, tetR family;
multimeric complexes2yvh_AC
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSKSIY

Estimated binding specificities ?

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# IC=6.383 IC/col=0.912 n_of_columns=7 specificity:   
A |   7   0   9   0   7  14   0
C |   7   0   7  96   7   0   0
G |  73  96   7   0  75  73   0
T |   9   0  73   0   7   9  96
scan!

Dendrogram of similar interfaces ?

matrix format

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updated Fri Sep 13 16:51:30 2024