2yvh_AC : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE OPERATOR-BINDING FORM OF THE MULTI-DRUG BINDING TRANSCRIPTIONAL REPRESSOR CGMR
reference	Shirakihara et al. J.Mol.Biol. 403 174 2010
source	Corynebacterium glutamicum
experiment	X-ray (resolution=2.50, R-factor=?)
structural superfamily	Tetracyclin repressor-like, C-terminal domain;Homeodomain-like;
reference complex	2yvh_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2yvh_A interface=34,35,36,39,40, skkemilrtaidyigeysletlsydslaeatglSKSglIYhfpsrhalllgmhelladdwdkelrditrdpedplerlravvvtlaenvsrpellllidapshpdflnawrtvnhqwipdtddlendahkravylvqlaadglfvhdyihddvlskskrqamletilelip > 2yvh_C interface=34,35,36,39,40, skkemilrtaidyigeysletlsydslaeatglSKSglIYhfpsrhalllgmhelladdwdkelrditrdpedplerlravvvtlaenvsrpellllidapshpdflnawrtvnhqwipdtddlendahkravylvqlaadglfvhdyihddvlskskrqamletilelip
interface signature	SKSIY/SKSIY

Estimated binding specificities ?

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# IC=10.018 IC/col=0.835 n_of_columns=12

specificity:

A |   0   6  24  85   0   0   0  11   0  13  24   5
C |  86   0  24  11  96   0   0  11  91   5  24   5
G |   5  90  24   0   0  96   5   0   0  73  24   5
T |   5   0  24   0   0   0  91  74   5   5  24  81

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updated Tue Jul 29 18:56:01 2025