interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE DIMERIC FORM OF REPE IN COMPLEX WITH THE REPE OPERATOR DNA
(Replication initiation protein)
referenceNakamura et al. Proc.Natl.Acad.Sci.Usa 104 18484 2007
sourceEscherichia coli
experimentX-ray (resolution=3.14, R-factor=0.266)
structural superfamily"Winged helix" DNA-binding domain;
sequence familyInitiator Replication protein;
multimeric complexes2z9o_AB
reference complex8ac8_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSYRPDRR

Estimated binding specificities ?

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# IC=4.051 IC/col=0.810 n_of_columns=5 specificity:   
A |   0  10  10  66  10
C |   0  12  85  10  85
G |  96  10   0  10   1
T |   0  64   1  10   0
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updated Thu Sep 12 16:40:37 2024