3brf_A : 3D-footprint complex

structure name	CSL (LAG-1) BOUND TO DNA WITH LIN-12 RAM PEPTIDE, C2221 (LIN-12 AND GLP-1 PHENOTYPE PROTEIN 1, ISOFORM A)
reference	Wilson et al. J.Biol.Chem. 283 14781 2008
source	CAENORHABDITIS ELEGANS
experiment	X-ray (resolution=2.47, R-factor=0.232)
structural superfamily	DNA-binding protein LAG-1 CSL;p53-like transcription factors;E set domains;
sequence family	Betatrefoil; LAG1, DNA binding; IPT/TIG domain;
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3brf_A interface=33,36,38,137,138,141,166,167, sltsdrmidflsnkekyecvisifhakvaqksYgnEkRffcpppciyligqgwklkkdrvaqlyktltelvayigigsdtserqqldfpniydycaaktlyisdsdkrkyfdlnaqffygcgmeiggfvsqrikviSKpsKkkqsdckylciasgtkvalfnrlrSQtvstrylhvegnafhasstkwgaftihlfddeqetdnfavrdgfvyygsvvklvdsvtgialprlrirkvdkqqvildascseepvsqlhkcafqmidnelvylclshdkiiqhqatainehrhqindgaawtiistdkaeyrffeamgqvanpispcpvvgslevdghgeasrvelhgrdfkpnlkvwfgatpvettfrseeslhcsippvsqvrneqthwmftnrttgdvevpislvrddgvvyssgltfsyks
interface signature	YERSKKSQ

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# IC=7.625 IC/col=0.953 n_of_columns=8

A |   7   0   0   7   0  96   7  73
C |   7   0  96  75  96   0  73   7
G |   9   0   0   7   0   0   9   9
T |  73  96   0   7   0   0   7   7

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updated Mon Dec 16 20:33:16 2024