3cbb_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HEPATOCYTE NUCLEAR FACTOR 4ALPHA IN COMPLEX WITH DNA: DIABETES GENE PRODUCT
reference	Melikishvili et al.
source	Homo sapiens
experiment	X-ray (resolution=2.00, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3cbb_A interface=21,24,28,29, alcaicgdratgkhygasscDgcKgffRRsvrknhmyscrfsrqcvvdkdkrnqcrycrlkkcfragmkkeavqne > 3cbb_B interface=21,24,28,29, alcaicgdratgkhygasscDgcKgffRRsvrknhmyscrfsrqcvvdkdkrnqcrycrlkkcfragmkkeavqnerd
interface signature	DKRR/DKRR

Estimated binding specificities ?

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# IC=10.986 IC/col=0.916 n_of_columns=12

specificity:

A |   4   0  72  88   0   9  24   4   0   4  76   0
C |   4   0   9   0  96  72  24   7   0   0   0  96
G |   4  96   9   4   0   4  24   4  96  91  19   0
T |  84   0   6   4   0  11  24  81   0   1   1   0

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updated Fri Dec 13 14:34:22 2024