3cbb_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF HEPATOCYTE NUCLEAR FACTOR 4ALPHA IN COMPLEX WITH DNA: DIABETES GENE PRODUCT
reference	Melikishvili et al.
source	Homo sapiens
experiment	X-ray (resolution=2.00, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3cbb_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3cbb_A interface=21,24,28,29, alcaicgdratgkhygasscDgcKgffRRsvrknhmyscrfsrqcvvdkdkrnqcrycrlkkcfragmkkeavqne > 3cbb_B interface=21,24,28,29, alcaicgdratgkhygasscDgcKgffRRsvrknhmyscrfsrqcvvdkdkrnqcrycrlkkcfragmkkeavqnerd
interface signature	DKRR/DKRR

Estimated binding specificities ?

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# IC=10.920 IC/col=0.910 n_of_columns=12

specificity:

A |   4   0  65  88   0  10  24   0   0   0  65   0
C |   8   0   8   0  96  61  24   0   0   0   6  96
G |   6  96  15   4   0   4  24   0  96  96  17   0
T |  78   0   8   4   0  21  24  96   0   0   8   0

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updated Mon Sep 9 17:21:04 2024