| structure name | CRYSTAL STRUCTURE OF AN ALKA HOST/GUEST COMPLEX 2'-FLUORO-2'- DEOXYINOSINE:ADENINE BASE PAIR (DNA-3-methyladenine glycosylase 2) |
| reference | Verdine et al. Structure 16 1166 2008 |
| source | Escherichia coli |
| experiment | X-ray (resolution=2.30, R-factor=?) |
| structural superfamily | DNA-glycosylase;TATA-box binding protein-like; |
| sequence family | AlkA Nterminal domain; HhHGPD superfamily base excision DNA repair; |
| multimeric complexes | 3cvs_AB 3cvs_CD 3cvt_AB 3cvt_CD 3cw7_AB 3cw7_CD 3cwa_AB 3cwa_CD 3cws_AB 3cws_CD 3cwt_AB 3cwt_CD 3cwu_AB 3cwu_CD 3d4v_AB 3d4v_CD |
| redundant complexes | 3oh9 3ogd 3oh6 3cvt 3d4v 3cwa 1diz 3cws 3cwu 3cvs 3cw7 |
| reference complex | 3cw7_C |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix format--LG-------------------- +------3cwt_D +------5 --NG--RG------FG--RC---- ! ! +-4ejy_A ! +----4 --NCNANARC----YGRC------ ! +-2xhi_A +--7 --QTLAHGAT--------KT---- ! ! +3s6i_A ! ! +-------2 QGKGLGSGAG--SC--LTKC---- ! ! ! +4b21_A ! +----6 --QGCGTA----LC---------- --8 ! +-1orn_A ! +------3 ------------YG------CTRG L ! ! +5kn8_A ! +-1 --QG--RG----YC---------- ! +6u7t_A ! NGRGTG----LG----LCRG---- +----------------4ew0_A |
home
updated Thu Sep 12 17:02:55 2024