3d1n_MO : 3D-footprint complex

structure name	STRUCTURE OF HUMAN BRN-5 TRANSCRIPTION FACTOR IN COMPLEX WITH CORTICOTROPHIN-RELEASING HORMONE GENE PROMOTER
reference	Pereira et al. J.Struct.Biol. 167 159 2009
source	Homo sapiens
experiment	X-ray (resolution=2.51, R-factor=?)
structural superfamily	lambda repressor-like DNA-binding domains;Homeodomain-like;
reference complex	3d1n_M
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3d1n_M interface=23,39,40,41,44,45,93,96,138,142,145, nmeeirefaknfkirrlslgltQtqvgqamtategpaySQSaiSRfeklditpksaqklkpvlekwlneaelrnqegqqnlmefvggepskkRkrRtsftpqaiealnayfeknplptgqeitemakelnydrevvrVwfsNrrQtlknt > 3d1n_O interface=23,39,40,41,44,45,93,96,138,142,145, nmeeirefaknfkirrlslgltQtqvgqamtategpaySQSaiSRfeklditpksaqklkpvlekwlneaelrnqegqqnlmefvggepskkRkrRtsftpqaiealnayfeknplptgqeitemakelnydrevvrVwfsNrrQtlknt
interface signature	QSQSSRRRVNQ/QSQSSRRRVNQ

Estimated binding specificities ?

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# IC=19.534 IC/col=0.888 n_of_columns=22

specificity:

A |  79   0  82  92  92  24   6  96   0  86  24  24   1  92   0  79  24   0   0   3  87   4
C |   8   0   3   0   0  24   1   0   4   7  24  24   6   1   0   0  24   0   0   0   3   3
G |   6   0   3   1   3  24   3   0   0   3  24  24   3   3   0   3  24   0   0   0   3   3
T |   3  96   8   3   1  24  86   0  92   0  24  24  86   0  96  14  24  96  96  93   3  86

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updated Mon Jan 5 03:32:31 2026