3d1n_MO : 3D-footprint complex

structure name	STRUCTURE OF HUMAN BRN-5 TRANSCRIPTION FACTOR IN COMPLEX WITH CORTICOTROPHIN-RELEASING HORMONE GENE PROMOTER
reference	Pereira et al. J.Struct.Biol. 167 159 2009
source	Homo sapiens
experiment	X-ray (resolution=2.51, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3d1n_M interface=23,39,40,41,44,45,93,96,138,142,145, nmeeirefaknfkirrlslgltQtqvgqamtategpaySQSaiSRfeklditpksaqklkpvlekwlneaelrnqegqqnlmefvggepskkRkrRtsftpqaiealnayfeknplptgqeitemakelnydrevvrVwfsNrrQtlknt > 3d1n_O interface=23,39,40,41,44,45,93,96,138,142,145, nmeeirefaknfkirrlslgltQtqvgqamtategpaySQSaiSRfeklditpksaqklkpvlekwlneaelrnqegqqnlmefvggepskkRkrRtsftpqaiealnayfeknplptgqeitemakelnydrevvrVwfsNrrQtlknt
interface signature	QSQSSRRRVNQ/QSQSSRRRVNQ

Estimated binding specificities ?

readout + contact

# IC=19.453 IC/col=0.884 n_of_columns=22

specificity:

A |  89   0  90  93  90  24  13  96   0  86  24  24   6  94   0  75  24   0   0   3  84   3
C |   2   0   2   1   2  24   2   0   2   4  24  24   6   0   0   3  24   0   0   0   2   2
G |   2   0   2   0   2  24   4   0   1   2  24  24   9   2   0   2  24   0   0   0   8   2
T |   3  96   2   2   2  24  77   0  93   4  24  24  75   0  96  16  24  96  96  93   2  89

scan!

home
updated Fri Dec 13 14:40:08 2024