interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF E253A MUTANT OF BMRR BOUND TO 22-BP OLIGONUCLEOTIDE
(BMR PROMOTER DNA)
referenceNewberry et al. J.Biol.Chem. 283 26795 2008
sourceSYNTHETIC CONSTRUCT
experimentX-ray (resolution=2.80, R-factor=0.234)
structural superfamilyProbable bacterial effector-binding domain;Putative DNA-binding domain;
sequence familyMerR family regulatory protein;
multimeric complexes7ckq_CDFGI
reference complex7ckq_G
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKRY

Estimated binding specificities ?

contactlogo
# IC=2.702 IC/col=0.676 n_of_columns=4 specificity:   
A |   9  19   1   0
C |  78  38  67   0
G |   9  28   9   0
T |   0  11  19  96
scan!

home
updated Thu Sep 12 17:03:35 2024