3dfv_CD : 3D-footprint complex

structure name	ADJACENT GATA DNA BINDING
reference	Bates et al. J.Mol.Biol. 381 1292 2008
source	Mus musculus
experiment	X-ray (resolution=3.10, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	4hc9_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3dfv_C interface=17,19,29,33,36,37,54,56, rragtscancqtttttLwRrnangdpvcNacgLyyKLhninrpltmkkegiqtRnR > 3dfv_D interface=17,19,29,33,36,37,54,56, rragtscancqtttttLwRrnangdpvcNacgLyyKLhninrpltmkkegiqtRnR
interface signature	LRNLKLRR/LRNLKLRR

Estimated binding specificities ?

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# IC=11.289 IC/col=0.806 n_of_columns=14

specificity:

A |  12  90   0  96  96  24  24  24   8   0  96   0  59  96
C |  19   6   0   0   0  24  24  24  19   0   0   0  25   0
G |  14   0   0   0   0  24  24  24  12   0   0   0   6   0
T |  51   0  96   0   0  24  24  24  57  96   0  96   6   0

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updated Wed Jun 24 15:27:21 2026