3dfx_AB : 3D-footprint complex

structure name	OPPOSITE GATA DNA BINDING
reference	Bates et al. J.Mol.Biol. 381 1292 2008
source	Mus musculus
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3dfx_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3dfx_A interface=19,20,22,32,36,57, saarragtscancqttttTLwRrnangdpvcNacgLyyklhninrpltmkkegiqtRn > 3dfx_B interface=19,20,22,32,36,40,57, saarragtscancqttttTLwRrnangdpvcNacgLyykLhninrpltmkkegiqtRn
interface signature	TLRNLR/TLRNLLR

Estimated binding specificities ?

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# IC=14.628 IC/col=1.125 n_of_columns=13

specificity:

A |  67  96  96   0   0  96   9  67   0  96   0  96  96
C |   9   0   0   0  96   0  11   9   0   0   0   0   0
G |  11   0   0   0   0   0  67   9  96   0   0   0   0
T |   9   0   0  96   0   0   9  11   0   0  96   0   0

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updated Tue Jul 29 20:15:18 2025