3dfx_AB : 3D-footprint complex

structure name	OPPOSITE GATA DNA BINDING
reference	Bates et al. J.Mol.Biol. 381 1292 2008
source	Mus musculus
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3dfx_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3dfx_A interface=19,20,22,32,36,57, saarragtscancqttttTLwRrnangdpvcNacgLyyklhninrpltmkkegiqtRn > 3dfx_B interface=19,20,22,32,36,40,57, saarragtscancqttttTLwRrnangdpvcNacgLyykLhninrpltmkkegiqtRn
interface signature	TLRNLR/TLRNLLR

Estimated binding specificities ?

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# IC=14.706 IC/col=1.131 n_of_columns=13

specificity:

A |   0   0  96   0   0   9   9   0   0  96   0   0  11
C |   0   0   0   0  96   9  69   0   0   0   0   0   9
G |   0   0   0   0   0   9   9   0  96   0   0   0   9
T |  96  96   0  96   0  69   9  96   0   0  96  96  67

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updated Mon Sep 9 17:26:44 2024