3dfx_AB : 3D-footprint complex

structure name	OPPOSITE GATA DNA BINDING
reference	Bates et al. J.Mol.Biol. 381 1292 2008
source	Mus musculus
experiment	X-ray (resolution=2.70, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3dfx_A interface=19,20,22,32,36,57, saarragtscancqttttTLwRrnangdpvcNacgLyyklhninrpltmkkegiqtRn > 3dfx_B interface=19,20,22,32,36,40,57, saarragtscancqttttTLwRrnangdpvcNacgLyykLhninrpltmkkegiqtRn
interface signature	TLRNLR/TLRNLLR

Estimated binding specificities ?

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# IC=14.667 IC/col=1.128 n_of_columns=13

specificity:

A |   0   0  96   0   0   9   9   0   0  96   0   0   9
C |   0   0   0   0  96  11  69   0   0   0   0   0   9
G |   0   0   0   0   0   9   9   0  96   0   0   0  11
T |  96  96   0  96   0  67   9  96   0   0  96  96  67

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updated Fri Dec 13 14:41:07 2024