3e40_AB : 3D-footprint complex

structure name	Q138F HINCII BOUND TO GTTAAC AND COCRYSTALLIZED WITH 5 MM CA2+
reference	Manohar et al. J.Mol.Biol. 383 186 2008
source	Haemophilus influenzae
experiment	X-ray (resolution=2.10, R-factor=?)
structural superfamily	Restriction endonuclease-like;
reference complex	2gig_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3e40_A interface=98,99,125,127,129,130,188,190,192,193,194,196,198, sfikpiyqdinsiligqkvkragepfeklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekQNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil > 3e40_B interface=93,119,121,123,124,182,184,186,187,188,190,192, sfikpiyqdinsiligqkvkreklvykflkenlsdltfkqyeylndlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekNdtadillvkdqfyelldvktrniskSaFaPNiisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfksepselYiNwAAAmQiQfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyil
interface signature	QNSFPNYNAAAQQ/NSFPNYNAAAQQ

Estimated binding specificities ?

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# IC=11.137 IC/col=1.114 n_of_columns=10

specificity:

A |  13   0   0   0   0  96  96   0   0  16
C |  57   0   0   0   0   0   0  96  96  13
G |  13  96  96   0   0   0   0   0   0  54
T |  13   0   0  96  96   0   0   0   0  13

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updated Mon Sep 9 17:30:09 2024