3eh8_G : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF Y2 I-ANII VARIANT (F13Y/S111Y)/DNA COMPLEX WITH CALCIUM (Intron-encoded DNA endonuclease I-AniI)
reference	Stoddard et al. 'Nucleic 37 877 2009
source	Emericella nidulans
experiment	X-ray (resolution=2.70, R-factor=0.201)
structural superfamily	Homing endonucleases;
sequence family	LAGLIDADG endonuclease;
reference complex	2qoj_Z
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3eh8_G interface=18,20,22,24,27,31,35,59,61,64,66,70,72,150,152,154,156,162,164,166,168,170,192,198,200,202,204, gsdltyaylvglyegdgYfSiTkKgkYltyElgiElsikdvqliykikkilgigivsfRkRneIeMvalRiRdknhlkskilpifekypmfsnkqydylrfrnallsgiiyledlpdytrsdeplnsiesiintsyfsawlvgfieaegCfSvYkLnkdddYlIaSfDiAqrdgdilisairkylsfttkvYldktnCsKlKvTsvrsveniikflqnapvkllgnkklqyklwlkqlrkisrysekikipsny
interface signature	YSTKYEERRIMRRCSYLYISDAYCKKT

Estimated binding specificities ?

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# IC=16.553 IC/col=0.828 n_of_columns=20

specificity:

A |   5   0  24  24   0  96  64  96  73  24  24  24   0   0   0   0   0   0   0  73
C |   5   1  24  24  91   0   5   0   5  24  24  24  96  96   0  96  96   0  96  13
G |   5   5  24  24   5   0  16   0   7  24  24  24   0   0   0   0   0   0   0   5
T |  81  90  24  24   0   0  11   0  11  24  24  24   0   0  96   0   0  96   0   5

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updated Thu Sep 12 17:07:54 2024