3g6p_AB : 3D-footprint complex

structure name	GR DNA BINDING DOMAIN:FKBP5 COMPLEX, 18BP
reference	Yamamoto et al. Science 324 407 2009
source	Rattus norvegicus
experiment	X-ray (resolution=1.99, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3g6p_A interface=25,26,30,74, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleaR > 3g6p_B interface=25,26,30,74, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleaRktkkkik
interface signature	KVRR/KVRR

Estimated binding specificities ?

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# IC=8.666 IC/col=0.578 n_of_columns=15

specificity:

A |   0  24   0  24  51   0  83  24  24  24   0   0   8  24  12
C |  96  24   0  24   6  96   0  24  24  24  12   0   6  24  83
G |   0  24  96  24  33   0   7  24  24  24   8  96  12  24   0
T |   0  24   0  24   6   0   6  24  24  24  76   0  70  24   1

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updated Mon Sep 9 17:34:26 2024