3g6q_AB : 3D-footprint complex

structure name	GR DNA BINDING DOMAIN:FKBP5 BINDING SITE COMPLEX-9
reference	Yamamoto et al. Science 324 407 2009
source	Rattus norvegicus
experiment	X-ray (resolution=2.26, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3g6q_A interface=24,25,29, hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkk > 3g6q_B interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear
interface signature	KVR/KVR

Estimated binding specificities ?

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# IC=7.861 IC/col=0.605 n_of_columns=13

specificity:

A |   0  24  64   0  72  24  24  24   0   0   8  24   0
C |   0  24   8  96   8  24  24  24   0   0   8  24  88
G |  96  24  16   0   8  24  24  24   0  96   8  24   0
T |   0  24   8   0   8  24  24  24  96   0  72  24   8

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updated Fri Dec 13 14:49:54 2024