3g6r_AB : 3D-footprint complex

structure name	GR DNA BINDING DOMAIN:FKBP5 COMPLEX-52, 18BP
reference	Yamamoto et al. Science 324 407 2009
source	Rattus norvegicus
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3g6r_A interface=25,26,30,74, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleaRktkkk > 3g6r_B interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear
interface signature	KVRR/KVR

Estimated binding specificities ?

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# IC=6.407 IC/col=0.493 n_of_columns=13

specificity:

A |   8  24  24   0  72  24  24  24   8   0   0  24   8
C |   8  24  24  96   8  24  24  24   8   0   0  24  72
G |  80  24  24   0   8  24  24  24   8  96   0  24   8
T |   0  24  24   0   8  24  24  24  72   0  96  24   8

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updated Fri Dec 13 14:50:05 2024