3g6u_AB : 3D-footprint complex

structure name	GR DNA-BINDING DOMAIN:FKBP5 16BP COMPLEX-49
reference	Yamamoto et al. Science 324 407 2009
source	Rattus norvegicus
experiment	X-ray (resolution=1.90, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3g6u_A interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktk > 3g6u_B interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearkt
interface signature	KVR/KVR

Estimated binding specificities ?

readout + contact

# IC=7.369 IC/col=0.567 n_of_columns=13

specificity:

A |   0  24  62   0  81  24  24  24   4   0   4  24   4
C |   0  24   9  96   4  24  24  24   4   0  14  24  88
G |  96  24  21   0   4  24  24  24   7  96  14  24   0
T |   0  24   4   0   7  24  24  24  81   0  64  24   4

scan!

home
updated Mon Sep 9 17:34:56 2024