3g8x_AB : 3D-footprint complex

structure name	GR DNA BINDING DOMAIN:GILZ 16BP COMPLEX-65
reference	Yamamoto et al. Science 324 407 2009
source	Rattus norvegicus
experiment	X-ray (resolution=2.05, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3g8x_A interface=24,25,29, hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktk > 3g8x_B interface=13,23,24,28, mclvcsdeasgcHygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktk
interface signature	KVR/HKVR

Estimated binding specificities ?

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# IC=8.073 IC/col=0.577 n_of_columns=14

specificity:

A |   0  24  24   0  74  24  24  24  10   0   0  24   0  66
C |   0  24  24  96   2  24  24  24  10   0   0  24  96  10
G |  96  24  24   0  10  24  24  24  64  96   0  24   0  10
T |   0  24  24   0  10  24  24  24  12   0  96  24   0  10

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updated Fri Dec 13 14:50:54 2024