3g97_AB : 3D-footprint complex

structure name	GR DNA-BINDING DOMAIN:GILZ 16BP COMPLEX-9
reference	Yamamoto et al. Science 324 407 2009
source	Rattus norvegicus
experiment	X-ray (resolution=2.08, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3g97_A interface=24,25,29, hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear > 3g97_B interface=24,25,29, hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlea
interface signature	KVR/KVR

Estimated binding specificities ?

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# IC=7.965 IC/col=0.613 n_of_columns=13

specificity:

A |   0  24  96   0   9  24  24  24   9   0   9  24   0
C |   0  24   0  96  67  24  24  24  11   0   9  24  96
G |  96  24   0   0   9  24  24  24   9  96  11  24   0
T |   0  24   0   0  11  24  24  24  67   0  67  24   0

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updated Fri Dec 13 14:51:00 2024