3g99_AB : 3D-footprint complex

structure name	GR DNA BINDING DOMAIN:PAL COMPLEX-9
reference	Yamamoto et al. Science 324 407 2009
source	Rattus norvegicus
experiment	X-ray (resolution=1.81, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3g99_A interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkk > 3g99_B interface=24,25,29, hmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlear
interface signature	KVR/KVR

Estimated binding specificities ?

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# IC=2.878 IC/col=0.262 n_of_columns=11

specificity:

A |  18  27  35   4  53  26  29  27  12   5   9
C |  11  23  21  84  16  23  22  22  14   3  11
G |  57  20  20   4  13  22  24  24  14  84  11
T |  10  26  20   4  14  25  21  23  56   4  65

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updated Fri Dec 13 14:51:10 2024