3g9i_AB : 3D-footprint complex

structure name	GR DNA BINDING DOMAIN: PAL COMPLEX-35
reference	Yamamoto et al. Science 324 407 2009
source	Rattus norvegicus
experiment	X-ray (resolution=1.85, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3g9i_A interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkk > 3g9i_B interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnlearktkkkik
interface signature	KVR/KVR

Estimated binding specificities ?

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# IC=6.047 IC/col=0.465 n_of_columns=13

specificity:

A |   6  24  83   0  76  24  24  24   8   0  24  24   6
C |   6  24   1  96   6  24  24  24   6   0  24  24  76
G |  76  24   6   0   8  24  24  24   6  96  24  24   8
T |   8  24   6   0   6  24  24  24  76   0  24  24   6

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updated Fri Dec 13 14:51:16 2024