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legend  pdf

structure nameGR DNA BINDING DOMAIN:PAL, 18BP COMPLEX-36
referenceYamamoto et al. Science 324 407 2009
sourceRattus norvegicus
experimentX-ray (resolution=2.32, R-factor=?)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
reference complex3g9m_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKVR/KVRR

Estimated binding specificities ?

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# IC=9.934 IC/col=0.662 n_of_columns=15 specificity:   
A |   0  24  57   0  96  24  24  24   0   0   0  24   0  21  19
C |   0  24  15  96   0  24  24  24   1   0   0  24  96  12   7
G |  96  24  12   0   0  24  24  24   6  96   0  24   0  12  64
T |   0  24  12   0   0  24  24  24  89   0  96  24   0  51   6
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updated Tue Jul 29 20:24:40 2025