3g9o_AB : 3D-footprint complex

structure name	GR DNA-BINDING DOMAIN:SGK 16BP COMPLEX-9
reference	Yamamoto et al. Science 324 407 2009
source	Rattus norvegicus
experiment	X-ray (resolution=1.65, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3g9o_A interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark > 3g9o_B interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark
interface signature	KVR/KVR

Estimated binding specificities ?

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# IC=6.702 IC/col=0.516 n_of_columns=13

specificity:

A |   7  24  24   0  96  24  24  24   0   0   7  15   9
C |   9  24  24  96   0  24  24  24   0   0  34  20  76
G |  61  24  24   0   0  24  24  24   0  96   9  23  11
T |  19  24  24   0   0  24  24  24  96   0  46  38   0

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updated Tue Jul 29 20:24:57 2025