interface graph thumbnail
legend  pdf

structure nameGR DNA BINDING DOMAIN:SGK 16BP COMPLEX-7
referenceYamamoto et al. Science 324 407 2009
sourceRattus norvegicus
experimentX-ray (resolution=1.65, R-factor=?)
structural superfamilyGlucocorticoid receptor-like DNA-binding domain;
reference complex3g9m_B
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKVR/KVR

Estimated binding specificities ?

readout + contactlogo
# IC=6.707 IC/col=0.516 n_of_columns=13 specificity:   
A |   1  40  25   0  96  24  24  24   0   0  24  24  10
C |  10  10  15  96   0  24  24  24   0   0  24  24  60
G |  80  31  46   0   0  24  24  24   0  96  24  24  10
T |   5  15  10   0   0  24  24  24  96   0  24  24  16
scan!

home
updated Wed Jun 24 15:38:49 2026