3g9p_AB : 3D-footprint complex

structure name	GR DNA BINDING DOMAIN:SGK 16BP COMPLEX-7
reference	Yamamoto et al. Science 324 407 2009
source	Rattus norvegicus
experiment	X-ray (resolution=1.65, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3g9p_A interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark > 3g9p_B interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark
interface signature	KVR/KVR

Estimated binding specificities ?

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# IC=6.593 IC/col=0.507 n_of_columns=13

specificity:

A |   9  24  48   0  96  24  24  24   0   0  24  24  11
C |   9  24  19  96   0  24  24  24   0   0  24  24  67
G |  76  24  20   0   0  24  24  24   0  96  24  24   9
T |   2  24   9   0   0  24  24  24  96   0  24  24   9

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updated Mon Sep 9 17:36:14 2024