3g9p_AB : 3D-footprint complex

structure name	GR DNA BINDING DOMAIN:SGK 16BP COMPLEX-7
reference	Yamamoto et al. Science 324 407 2009
source	Rattus norvegicus
experiment	X-ray (resolution=1.65, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3g9p_A interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark > 3g9p_B interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark
interface signature	KVR/KVR

Estimated binding specificities ?

readout + contact

# IC=6.659 IC/col=0.512 n_of_columns=13

specificity:

A |  11  24  59   0  96  24  24  24   0   0  24  24  19
C |   9  24  19  96   0  24  24  24   0   0  24  24  68
G |  67  24   9   0   0  24  24  24   0  96  24  24   9
T |   9  24   9   0   0  24  24  24  96   0  24  24   0

scan!

home
updated Tue Jul 29 20:25:03 2025