3g9p_AB : 3D-footprint complex

structure name	GR DNA BINDING DOMAIN:SGK 16BP COMPLEX-7
reference	Yamamoto et al. Science 324 407 2009
source	Rattus norvegicus
experiment	X-ray (resolution=1.65, R-factor=?)
structural superfamily	Glucocorticoid receptor-like DNA-binding domain;
reference complex	3g9m_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3g9p_A interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark > 3g9p_B interface=25,26,30, shmclvcsdeasgchygvltcgscKVffkRavegqhnylcagrndciidkirrkncpacryrkclqagmnleark
interface signature	KVR/KVR

Estimated binding specificities ?

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# IC=6.766 IC/col=0.520 n_of_columns=13

specificity:

A |   8  24  24   0  96  24  24  24   0   0  13  13   8
C |   8  24  24  96   0  24  24  24   0   0  21  23  74
G |  69  24  24   0   0  24  24  24   0  96  10  17  13
T |  11  24  24   0   0  24  24  24  96   0  52  43   1

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updated Fri Dec 13 14:51:46 2024