3hdd_AB : 3D-footprint complex

structure name	ENGRAILED HOMEODOMAIN DNA COMPLEX
reference	Chambers et al. J.Mol.Biol. 284 351 1998
source	Drosophila melanogaster
experiment	X-ray (resolution=2.20, R-factor=?)
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3hdd_A interface=1,42,43,46,47, RtafsseqlarlkrefnenrylterrrqqlsselglneaqiKIwfQNkrakikks > 3hdd_B interface=45,48,49,55, rprtafsseqlarlkrefnenrylterrrqqlsselglneaqikIwfQNkrakiKk
interface signature	RKIQN/IQNK

Estimated binding specificities ?

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# IC=9.938 IC/col=0.903 n_of_columns=11

specificity:

A |   0  96  90  24   6   0   6  72   0   6  96
C |   6   0   0  24   6   0   6   6   0   6   0
G |   6   0   6  24  78   0   6  12   0   6   0
T |  84   0   0  24   6  96  78   6  96  78   0

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updated Fri Dec 13 15:11:08 2024