structure name | X-RAY CRYSTAL STRUCTURE OF TANDEMLY CONNECTED ENGRAILED HOMEODOMAINS (EHD) WITH R53A MUTATIONS AND DNA COMPLEX (SEGMENTATION POLARITY HOMEOBOX PROTEIN ENGRAILED,...) |
reference | Sunami et al. 'Acta 76 824 2020 |
source | DROSOPHILA MELANOGASTER |
experiment | X-ray (resolution=1.60, R-factor=0.191) |
structural superfamily | Homeodomain-like; |
sequence family | Homeobox domain; |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | RRIKN |
Estimated binding specificities ?
readout + contact |
A | 17 0 72 0 0 11 0 C | 8 0 8 0 0 8 9 G | 63 96 8 0 0 69 87 T | 8 0 8 96 96 8 0scan! |
Dendrogram of similar interfaces ?
matrix formatRTRT------IAKGNA------ L +-----------6m3d_C +---------1 KGRT------IAQCNAYA--RT L +--2 +-----------1nk2_P ! ! --RT------ITQCNAACRG-- L +-3 +---------------------6a8r_A ! ! RCRT------NT--NAITRG-- +-4 +------------------------5zjt_B ! ! --RC------IAQCNAYC---- L +-5 +-------------------------3rkq_B ! ! --RTSTVCKGDCRG-------- L +-6 +--------------------------1w0t_A ! ! --RT----FTYAQTNAATRG-- L +-7 +--------------------------6ryd_F ! ! --RA----RCVTCTNAQTRC-- L --8 +---------------------------1au7_A ! --------RTVAITNAMCRG-- L +---------------------------1yrn_A |
home
updated Tue Dec 19 13:43:00 2023