3jrh_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP NON CONSENSUS SEQUENCE DNA F21
reference	Johnson et al. 'Genes 24 814 2010
source	Escherichia coli
experiment	X-ray (resolution=2.88, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	5ds9_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3jrh_A interface=68,77,78,82, sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn > 3jrh_B interface=75,84,85,89, mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn
interface signature	TNRR/TNRR

Estimated binding specificities ?

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# IC=8.836 IC/col=0.520 n_of_columns=17

specificity:

A |   0   0  15  24  84  17  24  24  24  24  24  21   5  24  15   0  96
C |   1   0   0  24   1  49  24  24  24  24  24   3   1  24  17  96   0
G |   1  96   7  24   0  17  24  24  24  24  24  67  90  24  53   0   0
T |  94   0  74  24  11  13  24  24  24  24  24   5   0  24  11   0   0

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updated Tue Jul 29 21:04:15 2025