3jrh_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF FIS BOUND TO 27 BP NON CONSENSUS SEQUENCE DNA F21
reference	Johnson et al. 'Genes 24 814 2010
source	Escherichia coli
experiment	X-ray (resolution=2.88, R-factor=?)
structural superfamily	Homeodomain-like;
reference complex	5ds9_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3jrh_A interface=68,77,78,82, sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn > 3jrh_B interface=75,84,85,89, mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvmqytrgnqTraalmmgiNRgtlRkklkkygmn
interface signature	TNRR/TNRR

Estimated binding specificities ?

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# IC=9.349 IC/col=0.550 n_of_columns=17

specificity:

A |   2   0   2  24   0  16  24  24  24  24  24  10   2  24  85   0  92
C |   2   0  82  24  80  57  24  24  24  24  24   5   0  24   5  96   2
G |   2  96   5  24   0  10  24  24  24  24  24  65   1  24   4   0   2
T |  90   0   7  24  16  13  24  24  24  24  24  16  93  24   2   0   0

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updated Mon Jan 5 04:29:11 2026